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PLASMA: Fast and Interpretable Protein Substructure Alignment via Optimal Transport
A deep dive into PLASMA, a plug-and-play module that reframes protein substructure alignment as an optimal transport problem, achieving both speed and interpretability.
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Topotein: Why Proteins Need Topological Deep Learning
Introducing Topotein, a framework that brings topological deep learning to protein representation learning through the Protein Combinatorial Complex and TCPNet.